PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19756.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 197aa MW: 21462.7 Da PI: 9.9888

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0016	68	90	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F+++ L H +H PIN19756.1 68 YKCSMCSKVFRSHQALGGHKTSH 90 9*************999998886 PP
2	zf-C2H2	13.3	0.00025	112	134	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+ksF+r L H+r+H PIN19756.1 112 HKCCICHKSFRRGQALGGHMRKH 134 79********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MAFVALNTPP PPSAVAQPTS LHRKDKAVPD RFSDEEYNIA ECLLMLSRSG PTLTIPAAFH 60 PPAEEDRYKC SMCSKVFRSH QALGGHKTSH RHKPPLAAAM SPRGPELNIR VHKCCICHKS 120 FRRGQALGGH MRKHHEGLIS VRGKKVRNIS EGVTTSSCVT SSYGGATNQS GGDVTPVRRT 180 LDLYLPPPTG LDLTLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	2e-23	C2H2 family protein