PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19757.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 204aa MW: 21802.1 Da PI: 8.5899

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	75	97	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cgk+F++ L H +H PIN19757.1 75 YRCTLCGKVFTSYQALGGHKTLH 97 9**********999998887766 PP
2	zf-C2H2	11.5	0.00096	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF + +L H r+H PIN19757.1 119 HECSICHKSFQTGQQLGGHKRKH 141 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MPPWAANQST PRRRRRADDS SVTDDVDSRR KTKQPKKLVA DEEGFVAACL VLLSHGDDAS 60 ASPLEPTPAD NRNPYRCTLC GKVFTSYQAL GGHKTLHRKN PSFAAGKDGG GCAENSGRHE 120 CSICHKSFQT GQQLGGHKRK HYRGVLKAGA NSGRNSYDGA GSSSVVTAAS YGGAISNSDD 180 DGETPKTLDM YLSPPSELDL TLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67450.1	2e-24	C2H2 family protein