PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19909.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 219aa    MW: 24729.4 Da    PI: 4.8713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.3e-1763113155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +++Wv+e+r+p     + kr++lg++  +e+Aa+a++ a+++l+g
  PIN19909.1  63 PVYRGVRRRD-SNKWVCELREPI----KqKRIWLGTYPNPEMAARAHDVAALALRG 113
                 68*****999.7*********72....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MENYSPTSNS DPYSFQIPSR DFSETTSSTG RARSHSDEEA VILAASRPKK RAGRKKFKET  60
RHPVYRGVRR RDSNKWVCEL REPIKQKRIW LGTYPNPEMA ARAHDVAALA LRGQMACLNF  120
ADSVWRLPIP ASTDAKDLRK AAVEAAEAFR PTAGGEEVEQ EERNEDNEGE KEAFLEGYED  180
FSVEGLADGV LLSPPPCWGR SNFSWDEVES DAEVELWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.26e-48ERF family protein