PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19917.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-YB

Protein Properties

Length: 256aa MW: 28916.6 Da PI: 6.2875

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.8	2.3e-56	92	187	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd+lwa++tlGfedyv+plk+yl+kyrelegek PIN19917.1 92 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDILWAITTLGFEDYVNPLKLYLTKYRELEGEK 187 89*******************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MKRERDNIED DERPQTGPNK TNFRTNPENT YSKINNINNN NNNIIIPPTN INNNNNVSNA 60 NASSNTNANR STGTGTSTAT ADNNSNNNNN NKEQDRFLPI ANVGRIMKKV IPGNGKISKD 120 AKETVQECVS EFISFVTGEA SDKCQREKRK TINGDDILWA ITTLGFEDYV NPLKLYLTKY 180 RELEGEKLNV PKQQRGEQRL QHEQTSCVPY NNVYSSTNMM SQPSFVSNDS PFPLNFSQNP 240 MQAPSLSQQD HVDEHW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G13570.1	1e-64	NF-YB family protein