PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19929.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 520aa MW: 60422.2 Da PI: 6.8129

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.2	1.2e-17	20	108	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn.Hela 90 kfYn+YA+ +GFs+rk++ +k +++i++rtf+C ++g+r+++k++ + + ++ etr g a++++ ++++k+++ ++ eHn H+l+ PIN19929.1 20 KFYNDYARVIGFSIRKQTVHKD-IKRRIIDRTFCCACQGHRHKDKRD-LTFKYHHLETRKGSCAMMRIDGRNSSKYKIVIFVAEHNgHDLV 108 6***************9998.6667*************999.777777888888888*********************78876 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MEFDIPKIGM EFDTEEAAYK FYNDYARVIG FSIRKQTVHK DIKRRIIDRT FCCACQGHRH 60 KDKRDLTFKY HHLETRKGSC AMMRIDGRNS SKYKIVIFVA EHNGHDLVSP SKTHVLRSHR 120 AITIAQALQE DDIDGSRIAP IEPQLDVPNF FYAIQVDEDN LIANIIWADA QIVADYAHFE 180 KIKKANHLPF FVGVNHHKQT IIFGAALLYD EMVATFMWLF DTLARAMSRK QPKTILIDQD 240 TAMAKALAIK WPKTCHRLCI WHIYQNAAIH LSDIFSCFVS FSKDFSSCIY DYDEEEEFLN 300 AWHEILIEDH RYQELKADLR TNQSTPVAFF TNEILKRAAS IYTHDVFEFF QDEVCKAYDS 360 RVELCGEKSM NETEEKNMNG VHFKELHSLT NQLVTQGALT VESFRIAKMG LLKMIEEGSS 420 LSSVEPFRHA QIFNPTINQQ LNFTPCYSRE AQILMHDIMS HKVEVDFDSY KFWSIGKVNI 480 DRIALLFNTS VILTPRCSSK FIMFESCTFF NRSIFHSQVI

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MEFDIPKIGM EFDTEEAAYK FYNDYARVIG FSIRKQTVHK DIKRRIIDRT FCCACQGHRH  60
KDKRDLTFKY HHLETRKGSC AMMRIDGRNS SKYKIVIFVA EHNGHDLVSP SKTHVLRSHR  120
AITIAQALQE DDIDGSRIAP IEPQLDVPNF FYAIQVDEDN LIANIIWADA QIVADYAHFE  180
KIKKANHLPF FVGVNHHKQT IIFGAALLYD EMVATFMWLF DTLARAMSRK QPKTILIDQD  240
TAMAKALAIK WPKTCHRLCI WHIYQNAAIH LSDIFSCFVS FSKDFSSCIY DYDEEEEFLN  300
AWHEILIEDH RYQELKADLR TNQSTPVAFF TNEILKRAAS IYTHDVFEFF QDEVCKAYDS  360
RVELCGEKSM NETEEKNMNG VHFKELHSLT NQLVTQGALT VESFRIAKMG LLKMIEEGSS  420
LSSVEPFRHA QIFNPTINQQ LNFTPCYSRE AQILMHDIMS HKVEVDFDSY KFWSIGKVNI  480
DRIALLFNTS VILTPRCSSK FIMFESCTFF NRSIFHSQVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-51	FAR1 family protein