PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19935.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 238aa MW: 27073.8 Da PI: 5.7704

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.5	3.3e-10	69	112	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 e+Er+RR+riN +++Lr ll + K +Ka+ L k+v+ I++L PIN19935.1 69 AEAERKRRERINGHLDRLRALLLCN-----SKTDKASLLAKVVQRIREL 112 589*******************8.....7**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MQPENSPEFS LFDQLFAGNG LNGGYEAAQS FYSSSFYPME LLEFSDDHQI NKADRQARAF 60 AASENHKEAE AERKRRERIN GHLDRLRALL LCNSKTDKAS LLAKVVQRIR ELKQQTSEIM 120 QFDQTFPSEV DEIAVLQNHD SVDGKSIVKA SLCCEDRVDL ITDLIEILKP LPLSPLRAEM 180 ATMGGRMRNV IVLAGDKDQT DESVLLLRDA LQTLVLRSSY VADQRSKRRR MLDQMILR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	77	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	9e-56	bHLH family protein