PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19938.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 237aa MW: 26812.6 Da PI: 6.9283

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.1	4.9e-11	65	111	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+Er+RR+riN +++Lr ll + K +Ka+ L k+v+ +++L PIN19938.1 65 ENHKEAERKRRERINGHLDRLRALLLCN-----SKTDKASLLAKVVQRVREL 111 68***********************8.....7**********998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MQPENSPEFS LFDQLFAGNG LNGGYPAAQS SFCSSSFFPM EMLEFSDDHQ TNKADRQARA 60 FAASENHKEA ERKRRERING HLDRLRALLL CNSKTDKASL LAKVVQRVRE LKQQTSEIMQ 120 LDQTFPSEAD EITVLQNHDS VDGKSIVKAS LCCEDRVDLI TDLIEILKPL PLSPLRAEMA 180 TMGGRMRNVI VLAGDKDQTD ESVLLLRDAL KTLVLRSSYV ADQRSKRRRM LDQMILR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	76	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	2e-58	bHLH family protein