PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19994.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 346aa    MW: 38053.8 Da    PI: 6.518
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH284e-09189236455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++ Lq
  PIN19994.1 189 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQALQ 236
                 8*************************9....89999*************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MEPKSEATQP QFRSGISGPR TGEMGLGLDE IHGLLSGPPE TDSSSFTALL ELPPPQAVEL  60
LVKEDFPAKP MPPPIFPSNI ALIDRASKFS VFASADNSLE STTILSASSS MTLDLVKQEP  120
LETESHPNSS SPAVSNQSLK ASKRKEREKK VKESNKKSKK VVGNEASQES TEKLPYVHVR  180
ARRGQATDSH SLAERARREK INARMKLLQE LVPGCNKISG TAMVLDEIIN HVQALQRHVE  240
FLSMRLAAVN PRIDFNLDDL LAAENGSSID NSFPSTFAPS IWPEGHISGS RQHQYPQLWH  300
LDGLHQHSWG REEDNSNFIN PENSLLSYGS PANSASLHSI QLKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.29e-87bHLH family protein