PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20007.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 365aa MW: 38660.8 Da PI: 8.9606

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135.8	1.3e-42	72	147	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y+ rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ PIN20007.1 72 RCQVEGCKVDLSDAKAYYCRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 147 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEKGSSSSSS SSGGGAADSL NGLKFGKTIY FEGVGSGLRP KSGGEVLPEA APPPSPAKKG 60 RTAVVQGGQP PRCQVEGCKV DLSDAKAYYC RHKVCGMHSK SPKVIVAGLE QRFCQQCSRF 120 HQLPEFDQGK RSCRRRLAGH NERRRKPPAG PVLSSHYGSL STSTFDNHGK TGGFMMDFTA 180 YNSTLAGRDS WPNTTSDRGL GNQATITGKY QLPWQSNSRN PPDLLQGPST RPCYSGPGGS 240 SEGCLNGVSD STGALSLLSN QPWGSQSQSS TIGVNSLLGT NSTTIVQPPV NPNASSSPFP 300 CPSWGFKGNQ ANNALHEIAP DVGSAQISHL ASRHYSGDLG LAQPNDGQYQ ELEPSRGYDS 360 MHWSL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEKGSSSSSS SSGGGAADSL NGLKFGKTIY FEGVGSGLRP KSGGEVLPEA APPPSPAKKG  60
RTAVVQGGQP PRCQVEGCKV DLSDAKAYYC RHKVCGMHSK SPKVIVAGLE QRFCQQCSRF  120
HQLPEFDQGK RSCRRRLAGH NERRRKPPAG PVLSSHYGSL STSTFDNHGK TGGFMMDFTA  180
YNSTLAGRDS WPNTTSDRGL GNQATITGKY QLPWQSNSRN PPDLLQGPST RPCYSGPGGS  240
SEGCLNGVSD STGALSLLSN QPWGSQSQSS TIGVNSLLGT NSTTIVQPPV NPNASSSPFP  300
CPSWGFKGNQ ANNALHEIAP DVGSAQISHL ASRHYSGDLG LAQPNDGQYQ ELEPSRGYDS  360
MHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57920.1	3e-51	SBP family protein