PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20026.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ZF-HD
Protein Properties Length: 257aa    MW: 27889.8 Da    PI: 10.2657
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer94.68.4e-3075129358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  +v+Y eClkNhAa++Gg+a+DGCgEfm+  geegt +alkC+AC+CHRnFHR+ ++
   PIN20026.1  75 GVKYTECLKNHAAAIGGNATDGCGEFMAG-GEEGTLEALKCSACNCHRNFHRKIHV 129
                  699*************************9.999*******************9765 PP
2Homeobox15.23.8e-05190246153
                 TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                 +r Rt+ft+eq e +  + e    k ++++ +e ++  +++g++ ++ kvW +N ++
  PIN20026.1 190 KRFRTKFTQEQKEKMLGFAEkagwKLQKLDDSEVRRFCQEIGIKRKVLKVWMHNNKY 246
                 789***********977555666689****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MSISSQGPKP LVAALPTNTP MPSPSIDHQA GKSSTDIVLR TAAAPSNVNV HPRSPGLEDG  60
HVMMNKSFIK QSSAGVKYTE CLKNHAAAIG GNATDGCGEF MAGGEEGTLE ALKCSACNCH  120
RNFHRKIHVH TEPASSNSRR YPSASAPACA KKSNTIYSGG AKLGLAAGNQ LTYKPKSMEG  180
EGQLLGEVKK RFRTKFTQEQ KEKMLGFAEK AGWKLQKLDD SEVRRFCQEI GIKRKVLKVW  240
MHNNKYNLSK KTNTSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.14e-60ZF-HD family protein