PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20126.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

BBR-BPC

Protein Properties

Length: 239aa MW: 27106.3 Da PI: 10.3074

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	77.5	5e-24	144	194	251	301
GAGA_bind 251 rgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +g Ri+grKmS+g ++klL La G dls+pvDLk+hWAkHGtn fvti+ PIN20126.1 144 PGKRISGRKMSRGPYRKLLYTLAIGGRDLSQPVDLKNHWAKHGTNMFVTIK 194 689***********************************************8 PP
2	GAGA_bind	55.3	3.1e-17	196	239	258	301
GAGA_bind 258 rKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 r++ +g ++klL La +dls+pvDLk+hWAkHGtn fvti+ PIN20126.1 196 RRLCRGPYRKLLYTLAIGVHDLSQPVDLKNHWAKHGTNMFVTIK 239 778899*************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MWVQDPLGHS TGPKNNMPPR CSTICEVQGT RDQYGCGPTE SCCSQTYEMT SDPGIAAVPI 60 RTVAPKNPGK KWERKTNYSY KMQPFASHLL KPKELKKKTH ASEKAKPKSK LEVHEEERFD 120 FSNVPSPFVA VQELPHDATN QELPGKRISG RKMSRGPYRK LLYTLAIGGR DLSQPVDLKN 180 HWAKHGTNMF VTIKLRRLCR GPYRKLLYTL AIGVHDLSQP VDLKNHWAKH GTNMFVTIK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	100	KKKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35550.3	9e-20	BBR-BPC family protein