PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20171.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 208aa    MW: 23362.7 Da    PI: 10.187
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-1371115147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +W+++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PIN20171.1  71 RESWSEQEHDKFLEALHLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 115
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MVSLHPNPPP GQDFTHFYSC YMDRGDPMKT PAMKRSENNS VLETSSCWNA GAGLEDPSKK  60
VRKPYTITKS RESWSEQEHD KFLEALHLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ  120
KNGTSEHVPP PRPKRKAAHP YPQKAPKNVA SQPKGPLPLA TPLDPRHTMQ PELMPVPVNT  180
MGSGSLYPWT HNAVPAGSVS HISKGMFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-47MYB_related family protein