PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20187.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 180aa    MW: 20972.8 Da    PI: 7.0423
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.21.3e-12911711295
                 HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 k+++l++p + +++h+++   + ++tl d+sgr++ v+ +++k + + + t+GWk  ++ n +   D ++ ++ +r++++l+++
  PIN20187.1  91 KENQLRIPVDAINTHKIE--LTEEITLVDPSGREFHVRRRIWKDGTT-LYTGGWKTLCEKNVVTYDDRCICEFLRRDGGNLYIH 171
                 7789********999866..6669***************99999865.6688********************999999988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MHKFDMNTVI KASVFVTIEY TDIPSELLED WSSIFLDVYY ARLQNDHTAQ STSVSNSKKG  60
KFDWTGEDIF QSGLFPRPLN PYFVTRIRPQ KENQLRIPVD AINTHKIELT EEITLVDPSG  120
REFHVRRRIW KDGTTLYTGG WKTLCEKNVV TYDDRCICEF LRRDGGNLYI HGQYAPVKFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60140.12e-11B3 family protein