PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20194.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 349aa MW: 39486.2 Da PI: 9.1129

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.9	1.5e-14	64	154	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ +++Li+a + + +rg l +++W+ev++++ +++ +r+ +qC+++++ ++kryk +k + + + + +st+p+f++l+ PIN20194.1 64 CWSEDATRTLIDAWGRHYLEHNRGHLSQKQWQEVADAVnavhiTSGKHQRTDIQCQNRIDTVKKRYKIEKSNTVESNGRYKSTWPHFERLD 154 7***************************************999******************999999998888999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MIPHRTASHD TSDSENPSSS PRHRLSDDGK HVPSSLCYPT KLELSSDPKP PARRTPVFPS 60 REDCWSEDAT RTLIDAWGRH YLEHNRGHLS QKQWQEVADA VNAVHITSGK HQRTDIQCQN 120 RIDTVKKRYK IEKSNTVESN GRYKSTWPHF ERLDSLIGDS FPKTQNNNAN GHNRNLRPGI 180 SRSPELPPSP TSAPATLTKH RKSLPAMSNH QEKYPAVGPV GPSSKRSAPT SVAERIFSLM 240 AAAAAAVEAA EHEKDDDEDD STQWGWRPPA MDRTRKPSIE GFKMLAEAIT RLGEIYQKVE 300 TAKQRQILEL EKEKMLFAKD LEIERMRFFM ESLVGIEELK RATHRSGNC

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MIPHRTASHD TSDSENPSSS PRHRLSDDGK HVPSSLCYPT KLELSSDPKP PARRTPVFPS  60
REDCWSEDAT RTLIDAWGRH YLEHNRGHLS QKQWQEVADA VNAVHITSGK HQRTDIQCQN  120
RIDTVKKRYK IEKSNTVESN GRYKSTWPHF ERLDSLIGDS FPKTQNNNAN GHNRNLRPGI  180
SRSPELPPSP TSAPATLTKH RKSLPAMSNH QEKYPAVGPV GPSSKRSAPT SVAERIFSLM  240
AAAAAAVEAA EHEKDDDEDD STQWGWRPPA MDRTRKPSIE GFKMLAEAIT RLGEIYQKVE  300
TAKQRQILEL EKEKMLFAKD LEIERMRFFM ESLVGIEELK RATHRSGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	1e-37	Trihelix family protein