PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20301.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ZF-HD
Protein Properties Length: 111aa    MW: 12929.8 Da    PI: 8.1684
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer45.12.4e-14352560
  ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                  Y eC k h  ++Gg+ +DGC+Efm+     g     kC  C CHRnFHR+ v+++
   PIN20301.1  3 DYAECHKSHQ-DIGGK-TDGCQEFMQI----GFRWDAKCLICRCHRNFHRKVVKYK 52
                 69*******5.89997.7********9....556788**************98875 PP
2ZF-HD_dimer45.22.2e-1453108260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++v+Y++C k h  +  +  vDGC+Ef+p++++   a  l Ca CgC ++FHR e ++e
   PIN20301.1  53 TEVVYRKCHKIHDFKFRS-CVDGCQEFTPTSEQ--GAGELVCANCGCKKSFHRNEITKE 108
                  6899***********975.79********9444..5899***************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MEDYAECHKS HQDIGGKTDG CQEFMQIGFR WDAKCLICRC HRNFHRKVVK YKTEVVYRKC  60
HKIHDFKFRS CVDGCQEFTP TSEQGAGELV CANCGCKKSF HRNEITKEVT C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.17e-10ZF-HD family protein