PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20434.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 239aa MW: 27265.1 Da PI: 8.7251

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	4e-14	68	120	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ ah +Er+RR+++ + +++Lr+llP+ +K s ++ +Av+YIk+++ PIN20434.1 68 KKSAHRDIERQRRKEMATLYATLRSLLPTeY---ITGKRSTSDHMHEAVKYIKYME 120 689************************77...9****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MNTPSITENL SLESLGVLHS NELLEQELSV NNAFVESSNP NKKRRRASKS GNCQGNNIDE 60 QNCDCNLKKS AHRDIERQRR KEMATLYATL RSLLPTEYIT GKRSTSDHMH EAVKYIKYME 120 RNIEELRMRK DKLKKLYKSN GSFQNGSSNS VNFPKCVTVN YCLGGVEIII SCGLKKKDGF 180 PLSRVLVELI EIGHDIVSCI SSKANDRIIY RIQSQVNDWI TCIDLSELQQ RLANMVDFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	135	MRKDKLKK
2	131	136	DKLKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	2e-40	bHLH family protein