PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20530.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 154aa    MW: 17409.4 Da    PI: 9.8019
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000235072123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C + F ++  L  H++ H
  PIN20530.1 50 FSCNYCRRKFFSSQALGGHQNAH 72
                89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MNYEGNTTLN LSLSSRKTNQ LINLDLVLDR PAPISSSILP PLSPAEQRVF SCNYCRRKFF  60
SSQALGGHQN AHKLERTLAK KSRELTHVGS SHLRSGSSYG PVHGPGTGLD HQRHLARRDN  120
LNYGQFNWRS SEYDRGHESV HQEEMSQLDL SLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.18e-27C2H2 family protein