PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20574.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 305aa    MW: 32557.2 Da    PI: 7.099
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.3e-12228273555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  PIN20574.1 228 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 273
                 99***********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MRQPNRERDL PPMNGSINSV LNQHQIQSLQ EIHNHGQPQI LPSSNFDPSS QDDFLEQMLS  60
SVPSSAPSFP WADDQTAAGM VGNMEEQSSA TVFTSKLREQ QISDGAAKAL MLQQQLLLSR  120
GFAAANGALP HAEHNDVVDA PSFSSNLVND ASVKALFNAF TGSLGHTSNQ SQHFHHAQGG  180
ALQQSPNFGA PATPATSQPA ASASSGGAAG GQPKQRVRAR RGQATDPHSI AERLRRERIA  240
ERMKSLQELV PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAAV APLVADKSPE  300
GKSGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1233238RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.11e-29bHLH family protein