PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20665.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 329aa MW: 36866.4 Da PI: 6.7615

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++++ +G g+W++++r g+ R++k+c++rw +yl PIN20665.1 14 RGLWSPEEDEKLINYISTYGHGCWSSVPRLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	45.2	2.2e-14	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++ E l++++++ lG++ W+ Ia++++ gRt++++k++w+ PIN20665.1 67 RGSFSHSEASLIIELHRVLGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGYHTCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSV PRLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SHSEASLIIE LHRVLGNRWA QIAKHLPGRT DNEVKNFWNS SIKKRLISAK 120 NSDFSTQIGS NLYQNNNFLN IPNPQIDQIC NLPITPPIAI HGFDPIEARF EQVFHTNLIP 180 HNSIPFSCLP SWPCNNNNNN YNQIFKQDQN FILDHNPICP VLENQDSSIL IDNNNNINID 240 SNNNNNNNSI KVITNEPLLE EIVGISCGIS SGNSVDYIDS FMATFASSSP TSATSPAPLP 300 AALEGFCPPP CSNDFLVNPS VASMWDPQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	3e-75	MYB family protein