PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20673.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 167aa    MW: 18969.1 Da    PI: 9.6558
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-1986136255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp     k++r +lg++ t+e+Aa a+++a+ kl+g
  PIN20673.1  86 RYRGVRRRP-WGKFAAEIRDP---AkKSTRLWLGTYETPEDAALAYDQAAFKLRG 136
                 7********.**********8...4456*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDAQTISNSD IILLDSIQSY LLNDSDFPYD YCNLNPNPNL ISTTSFWAEN LSVDSTSKSE  60
DGSARESLET DTGAARDQNP RQEWRRYRGV RRRPWGKFAA EIRDPAKKST RLWLGTYETP  120
EDAALAYDQA AFKLRGTRAR LNFPHLIGSS TTLKPVKVTK RRRPPVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-33ERF family protein