PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20674.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 171aa    MW: 19495.9 Da    PI: 5.0924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.3e-1978128255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp     k  r +lg++ t+eeAa a+++a+ kl+g
  PIN20674.1  78 RYRGVRRRP-WGKFAAEIRDP---DrKGYRLWLGTYETPEEAALAYDQAAFKLRG 128
                 8********.**********8...3245*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MENILSEMDL ALLDSIQNYL LSDFDFPQDF QCNNIATPVS DDDQFSSQMI EELLCNDTKE  60
VDAPSEGVVN APPEEWKRYR GVRRRPWGKF AAEIRDPDRK GYRLWLGTYE TPEEAALAYD  120
QAAFKLRGSR ARVNFPHLVG SGVEPTRVTK RSHGSLDRPN VNPKKMKMAM A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-37ERF family protein