PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20675.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 175aa    MW: 19708.2 Da    PI: 5.8559
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-1981131255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp     k  r +lg++ t+eeAa a+++a+ kl+g
  PIN20675.1  81 RYRGVRRRP-WGKFAAEIRDP---DrKGSRLWLGTYETPEEAALAYDRAAFKLRG 131
                 7********.**********8...3245*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MEGILSEMDL AFLDSIQDYL LSDFDFSQDL LCDNIATPVS DDDQISSEMV EELLCNNNGD  60
TGEVDAPPKS VSQAPQVEWR RYRGVRRRPW GKFAAEIRDP DRKGSRLWLG TYETPEEAAL  120
AYDRAAFKLR GTKARVNFPH LVGSGVPEPT RVTKRSHSSM ARLNVRSKKM KMAVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153160TKRSHSSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-33ERF family protein