PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20681.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 306aa MW: 34162.5 Da PI: 8.4914

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.5e-19	139	193	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k PIN20681.1 139 RKKLRLSKEQAAVLEETFKEHNTLNPKQKMALAKQLNLRPRQVEVWFQNRRARTK 193 788899***********************************************98 PP
2	HD-ZIP_I/II	128.1	3.6e-41	139	228	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+++LEe+F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+L+r++++l+een+rL+kev+eLr +l PIN20681.1 139 RKKLRLSKEQAAVLEETFKEHNTLNPKQKMALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVTELR-AL 228 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MAEKDDGLGL SLSLRCSENQ ILDNPPPAPS PAPRSGAARF PFNLFKSPLP LVQEHKSSSA 60 YAFQPSPADR NADSRQLFRG IDVNRAVTVI DCDEEVMVSS PNSTVSSLSG KRSEREENDG 120 ERASSSLEME DDGGDAAARK KLRLSKEQAA VLEETFKEHN TLNPKQKMAL AKQLNLRPRQ 180 VEVWFQNRRA RTKLKQTEVD CEYLRRCCEN LTEENRRLQK EVTELRALKL SPQFYMNMSP 240 PTTLTMCPQC ERVAVSSSSS ATTSSTIPTN GAGLSRQPAH HQRPMPMNSW AAIFPPQPLD 300 SHRPRT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	196	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	8e-84	HD-ZIP family protein