PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20729.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 236aa MW: 26868.1 Da PI: 4.9509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149.7	1.4e-46	4	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp GfrF Pt+eel+++yL++k+e+k++++++vi+ vdiy+++PwdLpk +++++++w+fF++r++++ +g r++r+t+sgyWkatg+ v+s+ PIN20729.1 4 LPTGFRFYPTEEELISFYLHNKLEDKSTNINRVIPIVDIYQLDPWDLPKqcgeLCNGDTEQWFFFTPRQEREVRGGRPSRTTASGYWKATGSPSYVFSS 102 699*************************99************645643444777*********************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk++vfykg+ap+g+kt+W m+eyr+ PIN20729.1 103 DNKVIGVKKSMVFYKGKAPTGRKTKWKMNEYRA 135 *****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MEELPTGFRF YPTEEELISF YLHNKLEDKS TNINRVIPIV DIYQLDPWDL PKQCGELCNG 60 DTEQWFFFTP RQEREVRGGR PSRTTASGYW KATGSPSYVF SSDNKVIGVK KSMVFYKGKA 120 PTGRKTKWKM NEYRAIKEDS QTSAPKLMNE LSLCRVYIVS GSCRAFDRRP VYIGESSSSR 180 EVKITQENGE GIVGNSGMLL ERRGSSESLA SGENYDVENV GETADGLENL MEWEDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	8e-87	NAC family protein