PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20738.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-YB

Protein Properties

Length: 158aa MW: 17841.1 Da PI: 8.4603

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	42.7	1.4e-13	18	115	5	97
NF-YB 5 drflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 ++lP + v r++k+ l +++ is +d+ + e + fi ++++ a+d c++ +r+ in++d++ al ++ f++++ pl++ l+++r+ +++k PIN20738.1 18 AEELPKTIVRRLVKEKLSqlsSDSDISvlRDSLQAFSESARIFIHYLSATANDICKESNRQIINAEDVFKALEEIEFQEFIGPLRASLEEFRQKNAAK 115 567999999999998765111566666447999***********************************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MAAKENDKGL TEKVVSEAEE LPKTIVRRLV KEKLSQLSSD SDISVLRDSL QAFSESARIF 60 IHYLSATAND ICKESNRQII NAEDVFKALE EIEFQEFIGP LRASLEEFRQ KNAAKKAASL 120 GSSKTKDTNE KAKRKEQPAK GEGRKKRREV EKNDDNEV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	148	KRKEQPAKGEGRKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	3e-39	NF-YB family protein