PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20746.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 254aa    MW: 27005.2 Da    PI: 8.1596
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.0008109131123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k+F +   L  H  +H
  PIN20746.1 109 YKCSVCDKVFGSYQALGGHKASH 131
                 9*********9999998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSLEALNSPT TSTPSFKFEN ANRQYLESWT KGKRSKRSRS VERPEPTEEE YLALCLEYLA  60
LCLVMLARGG AGAGPSEEEK LSKFSQPQIQ TQKRVPPVVT SGEQSKSVYK CSVCDKVFGS  120
YQALGGHKAS HRKFTCGDDH SAASVATTTT SATASGGGRT HECSICHKCF PTGQALGGHK  180
RCHYDGGAPS GNGAGAGSSA LTSSEGVGST VTHRDFDLNL PALPGFGFGV EDEVESPHPA  240
KKSRFSPPLK LEVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-44C2H2 family protein