PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20790.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 261aa    MW: 29073.8 Da    PI: 10.1259
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.61.1e-162365447
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     WT eEd+ll  +vk++G+g+W+ Ia+ +  gRt+k+c++rw++ 
       PIN20790.1 23 WTREEDDLLTTLVKRYGPGNWDYIANFIR-GRTGKSCRLRWLNQ 65
                     *****************************.***********996 PP
2Myb_DNA-binding53.45.8e-1772116147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++T+eE+++l+++++q+G++ W++I++ ++ gRt++q+k+ ++ +
       PIN20790.1  72 KMPFTEEEQQRLLQLHRQYGNK-WAAISSFFP-GRTDNQVKNQYHVL 116
                      689*******************.*********.***********875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MEAFFQPSTV ANSSRRRFNK WHWTREEDDL LTTLVKRYGP GNWDYIANFI RGRTGKSCRL  60
RWLNQLNPKV NKMPFTEEEQ QRLLQLHRQY GNKWAAISSF FPGRTDNQVK NQYHVLVGSR  120
SMKSSGPSSS AVPHGPLEGR SIGSSGDGSV PMVLIGSQVS NVPYGGSSMP DKMKRMPLFS  180
GGSSSVCGRG FVPYSSNPIR LGPNSFNSIN LANIYRQARM CLGDSMTSDA NNCIAQAAQS  240
QTEGEVINYQ FIDFLGIESL K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.12e-34MYB family protein