PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20801.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 324aa MW: 36934.1 Da PI: 6.6991

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	5.7e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l++ ++++G+g +W + +++ g++R++k+c++rw++yl PIN20801.1 14 RGPWSPEEDAKLKEFIEKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	37.6	5.1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ + + G++ W+ Ia+ ++ gRt++++k++w++ PIN20801.1 69 GDFSDEEDRIICTLYASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 679****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MGRAPCCDKA SVKRGPWSPE EDAKLKEFIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGD FSDEEDRIIC TLYASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGI 120 INPSNQPKFS NPFSGTLQPQ DYSPFHFQSA KLISTLQNIS DQFPLPRSQY PYNYQQIQEG 180 LVDLQYYPGK DNNNGMLIFG GNEASCSSSD GSCSQISYGK DHMKQQQEMG CFKGFVSNSA 240 FEENQKYILH YGEYDHHYGD QISAFLDQKP NGFLENTQLE CDLEEVKQVF SSGNGSSNDN 300 NNNSTLWCND ENKTDEKGLY YHWH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	6e-77	MYB family protein