PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20819.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 244aa    MW: 27264.2 Da    PI: 6.0575
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.3e-21105155155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +grW+AeIrdp++    kr++lg+++t+eeAa  +++a+ +l+g
  PIN20819.1 105 KKFRGVRQRP-WGRWAAEIRDPTQ---GKRVWLGTYDTPEEAATVYDRAAVRLKG 155
                 59********.**********954...3***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEQRKPIVKF TEHVVTTNKL IYPRRKSSSA ANIRRKVVRI VLTDADATDS SGDESDGAGF  60
YVHRVRRHVE EIKFRDLSAQ VAGQDGRHNK KKDWNRPVND VSGRKKFRGV RQRPWGRWAA  120
EIRDPTQGKR VWLGTYDTPE EAATVYDRAA VRLKGSAAVI NFPEVTPVTE SATESDAVSS  180
GNDVALSPTS VLGHEELTPF SGIGGDFGFD VDWPLSLPDI GMSGNYYGEE FGEFDFDDFI  240
NDLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-39ERF family protein