PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20837.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 155aa MW: 17064.7 Da PI: 10.3858

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	39	61	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F++ L H +H PIN20837.1 39 FTCKTCNKQFPSFQALGGHRASH 61 89**********99999998887 PP
2	zf-C2H2	12.2	0.00057	86	108	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F+ L H+r+H PIN20837.1 86 HECSICGMEFPIGQALGGHMRRH 108 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MNKRSRDEQA AEDMAAMAKS LLLFSTTAAA GYSSSGRVFT CKTCNKQFPS FQALGGHRAS 60 HKKQRLAMAE GGDPTQPPSP AKRKTHECSI CGMEFPIGQA LGGHMRRHRE AINVDSPIVK 120 KVNSSRRVLV LDLNLTPLEN KFVFQKLLPA VDCFF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	86	KRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	7e-36	C2H2 family protein