PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20973.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 495aa MW: 53321 Da PI: 7.1105

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.3	1.7e-15	292	337	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq PIN20973.1 292 HNQSERKRRDKINERMKTLQKLVPNS-----SKTDKASMLNEVIEYLKQLQ 337 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MNQRVPSWDL DENLVVPPKI DPRGHSSSSN SSLPDVPSLD YEVAELTWEN GQLAMHGLGP 60 PRVVNKPTAS SSPTKYATWD KPRAGGTLES IVDQATCHPQ TKSAVDGGVD NANDLVPWLD 120 YNRTMVNPSA SASVTMTMDA LVPCNNNIPR SDCNQENSTH VLDPFHGSMV GCSTRVGSCS 180 AAGGAARVPR VGIGSCRTNG SVSESATCGG GRDSHQVTLD TYERDLGGGA FTSTSLLSPE 240 NTISGKEYTK ASTEDHDSVC HGRSQAGDED GKKKGTGKSS VSTKRSRAAA IHNQSERKRR 300 DKINERMKTL QKLVPNSSKT DKASMLNEVI EYLKQLQAQV HVMSRMNIPS MMLPLAMQQQ 360 LQMSMMAPAM GMGMGMGMGV MDMNTISRAA GIPPVIPPAA AFMPVQPWDN PGDGVPTPPP 420 PPPAGSVMPP DPLSAFLACQ SQPMNMEAYS RLAALYQQXP RGSVINGSDF VWMSFIWHHT 480 TITKIAMRFY QNIWD

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MNQRVPSWDL DENLVVPPKI DPRGHSSSSN SSLPDVPSLD YEVAELTWEN GQLAMHGLGP  60
PRVVNKPTAS SSPTKYATWD KPRAGGTLES IVDQATCHPQ TKSAVDGGVD NANDLVPWLD  120
YNRTMVNPSA SASVTMTMDA LVPCNNNIPR SDCNQENSTH VLDPFHGSMV GCSTRVGSCS  180
AAGGAARVPR VGIGSCRTNG SVSESATCGG GRDSHQVTLD TYERDLGGGA FTSTSLLSPE  240
NTISGKEYTK ASTEDHDSVC HGRSQAGDED GKKKGTGKSS VSTKRSRAAA IHNQSERKRR  300
DKINERMKTL QKLVPNSSKT DKASMLNEVI EYLKQLQAQV HVMSRMNIPS MMLPLAMQQQ  360
LQMSMMAPAM GMGMGMGMGV MDMNTISRAA GIPPVIPPAA AFMPVQPWDN PGDGVPTPPP  420
PPPAGSVMPP DPLSAFLACQ SQPMNMEAYS RLAALYQQXP RGSVINGSDF VWMSFIWHHT  480
TITKIAMRFY QNIWD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	301	ERKRRD
2	297	302	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-74	bHLH family protein