PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20982.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 89aa    MW: 10297.8 Da    PI: 10.2072
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.63e-131562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W  eEd +l  ++ ++G  +W++ + + g+ R++++c++rw +yl
       PIN20982.1 15 KGAWLGEEDNKLRAYILRYGHCNWTLLPIYAGLARSGNSCRLRWMNYL 62
                     799*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MVRPPNYNDS NGMKKGAWLG EEDNKLRAYI LRYGHCNWTL LPIYAGLARS GNSCRLRWMN  60
YLKPGLRGGN FTQQEKDLII QFHVQLGNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18710.11e-31MYB family protein