PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21067.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 723aa MW: 77374.5 Da PI: 5.9179

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.9	9.1e-33	303	360	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k PIN21067.1 303 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPDCPVKKKVERSH-EGHITEIIYKGAHNHPK 360 8**************************************.*************85 PP
2	WRKY	104.2	7.3e-33	512	570	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ PIN21067.1 512 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERASHDLKSVITTYEGKHNHD 570 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MSGLDDHVAI MGDWMPPSPG PRTFFSSVIS DDAAARPFAD SGSENKSGSF FTLSEGQGPS 60 VNADQNNAAQ ASIGHDEASN SNALQEPTTG SRGGLVERLA ARAGFNAPRL NTENIRLDDL 120 SNSPEVRAPY LTIPPGISPT TLLDSPVFLT NSRVQPSPTT GKFSFASSGN NGYSALMAND 180 SDKGKENTLE DPSSFAFKPI ADSSSIPYFN AINKVQASNF APQAFGVSSL LDASLQQQRV 240 EPPTVHTLTD SHADKNQGSN LSSEQTCNPI GGAENSPPFD EPNEDDGDQR SGGDPNVSGG 300 QADDGYNWRK YGQKQVKGSE YPRSYYKCTH PDCPVKKKVE RSHEGHITEI IYKGAHNHPK 360 PPPNRRSSLG SSNPLGDVQL ESEQPGTGEN GNLVWSSMQK GNVSGVPDWS QDNVEATTSA 420 VHEYGNGTTF PAQNGVQNET GDGVDRSSTF SNDEEDDRVT HGSVSLGYDG EGDESESKRR 480 RIDTYAPDIS GATRAIREPR VVVQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS 540 AGCNVRKHVE RASHDLKSVI TTYEGKHNHD VPAARSSSHV NSGGGSNTLH TQQAAAAAAA 600 SGHIHRPEPS QIHSNTARFE QPPLGPYSLP GRPQLGPGPA LGFGMNQPGL AGLGLARLGP 660 NPVLPVHPYL GHHQPRPMND MGYMLPKAEP KLEPLTTDSG LNSSDGSSVY QHLLNRLPLG 720 PQM

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MSGLDDHVAI MGDWMPPSPG PRTFFSSVIS DDAAARPFAD SGSENKSGSF FTLSEGQGPS  60
VNADQNNAAQ ASIGHDEASN SNALQEPTTG SRGGLVERLA ARAGFNAPRL NTENIRLDDL  120
SNSPEVRAPY LTIPPGISPT TLLDSPVFLT NSRVQPSPTT GKFSFASSGN NGYSALMAND  180
SDKGKENTLE DPSSFAFKPI ADSSSIPYFN AINKVQASNF APQAFGVSSL LDASLQQQRV  240
EPPTVHTLTD SHADKNQGSN LSSEQTCNPI GGAENSPPFD EPNEDDGDQR SGGDPNVSGG  300
QADDGYNWRK YGQKQVKGSE YPRSYYKCTH PDCPVKKKVE RSHEGHITEI IYKGAHNHPK  360
PPPNRRSSLG SSNPLGDVQL ESEQPGTGEN GNLVWSSMQK GNVSGVPDWS QDNVEATTSA  420
VHEYGNGTTF PAQNGVQNET GDGVDRSSTF SNDEEDDRVT HGSVSLGYDG EGDESESKRR  480
RIDTYAPDIS GATRAIREPR VVVQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS  540
AGCNVRKHVE RASHDLKSVI TTYEGKHNHD VPAARSSSHV NSGGGSNTLH TQQAAAAAAA  600
SGHIHRPEPS QIHSNTARFE QPPLGPYSLP GRPQLGPGPA LGFGMNQPGL AGLGLARLGP  660
NPVLPVHPYL GHHQPRPMND MGYMLPKAEP KLEPLTTDSG LNSSDGSSVY QHLLNRLPLG  720
PQM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	478	482	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-169	WRKY family protein