PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21084.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 426aa MW: 49395.5 Da PI: 7.0494

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29	3.5e-09	69	108	1	40
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 +fY +YA+ +GF+vrks+++++k + +++r++vCs+ g PIN21084.1 69 QFYIDYATAMGFNVRKSHKENRKGGNIVKNRELVCSRAGL 108 6*******************99999********995 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MLDVGYNIKE WHESCEEKKL DSCMLGTTSE KNDCINMNTD AQEKCNLSYS TDPSTILQLV 60 LNSVEEADQF YIDYATAMGF NVRKSHKENR KGGNIVKNRE LVCSRAGLWM PLKEACIHFA 120 HDISSGLYRV TNFNPYHNHP LETAKTEHVL KVNWLTFSGI RAGKAIDFME HLESGPGKLP 180 FRRKDDLIFS YTVDNEKTLT KLFWTNGMSR AEFRLFDNVL VFDNTYKTNT YQFPLVLFYG 240 INNHLGTYLL QEFCAAIGGL SSKSIPTDQD VAMRIAIELE FPEAKHRICN WHLEHFGALL 300 KRNYSIEKFE VTWVSLIEKH GVANHPWVID IYRKRELWSE AYCRGHFMGM MGTAQRVEYL 360 NALFKFSVGK IRAKFFENQE DAERSIPMIK NTALRILERQ ATFFYTNKVF SFVLEEIVKE 420 QGLLLE

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MLDVGYNIKE WHESCEEKKL DSCMLGTTSE KNDCINMNTD AQEKCNLSYS TDPSTILQLV  60
LNSVEEADQF YIDYATAMGF NVRKSHKENR KGGNIVKNRE LVCSRAGLWM PLKEACIHFA  120
HDISSGLYRV TNFNPYHNHP LETAKTEHVL KVNWLTFSGI RAGKAIDFME HLESGPGKLP  180
FRRKDDLIFS YTVDNEKTLT KLFWTNGMSR AEFRLFDNVL VFDNTYKTNT YQFPLVLFYG  240
INNHLGTYLL QEFCAAIGGL SSKSIPTDQD VAMRIAIELE FPEAKHRICN WHLEHFGALL  300
KRNYSIEKFE VTWVSLIEKH GVANHPWVID IYRKRELWSE AYCRGHFMGM MGTAQRVEYL  360
NALFKFSVGK IRAKFFENQE DAERSIPMIK NTALRILERQ ATFFYTNKVF SFVLEEIVKE  420
QGLLLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-34	FAR1 family protein