PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21233.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 567aa MW: 63861 Da PI: 5.5222

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33.5	7.3e-11	7	68	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ ++ed+sg++W+v+l + ++ +++GW+eF + ++L g +vF ++++s f vv+++++ PIN21233.1 7 QETQIEDSSGERWSVTL--KPVGDLLAFKNGWREFYRNHDLGYGQCLVFNYIKESHF--VVQIYQR 68 57899**********..999999*************************99999..9999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MNLAANQETQ IEDSSGERWS VTLKPVGDLL AFKNGWREFY RNHDLGYGQC LVFNYIKESH 60 FVVQIYQRSG CEILNFNNVR PQENNARPPQ KKRHKSDSET VSQDEPFQTP DVNSRKKHHS 120 PPPVTSRSKP QNRQTHLAVR NADLARRQIC SSSVTMDDPS WMIFRDDSYN NGEDRNFLYD 180 LSSFEMEKET PDAKKIEKAL DTVVSPSHTE FMEYANNFEI AAPCHTGTKE QTKTSEDVTD 240 VAVIHTNPTD GPSGDVFTDR VEEALDTRMA PSHALTKTSE DNSGTAVIHT NQTYGSSDDD 300 FSDKFEKMFT DVAPSSHTEI MEQSKTMEND TEMPVILSDQ ITGPSDDIFT EKSYAKPSNN 360 GILSKGMSND VPSLHDSKRT FTDLLGNKHV MALDSRSTFV GSSKIAEGAH AVKGWSFGSS 420 LVSSPAPNGP YGSRAIKKER VEWGEEASAF AEVSYVVKVE PDLSDEVVRP VEVRPFSAEV 480 KNLPYLELHI PPMPGRRDRG RGKVVYLRGS NGRLWPVLYP DVYSIKALTD NWTLFCRQNN 540 IKPGDECRFQ LEKDKDLLYI YKVDVKS

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MNLAANQETQ IEDSSGERWS VTLKPVGDLL AFKNGWREFY RNHDLGYGQC LVFNYIKESH  60
FVVQIYQRSG CEILNFNNVR PQENNARPPQ KKRHKSDSET VSQDEPFQTP DVNSRKKHHS  120
PPPVTSRSKP QNRQTHLAVR NADLARRQIC SSSVTMDDPS WMIFRDDSYN NGEDRNFLYD  180
LSSFEMEKET PDAKKIEKAL DTVVSPSHTE FMEYANNFEI AAPCHTGTKE QTKTSEDVTD  240
VAVIHTNPTD GPSGDVFTDR VEEALDTRMA PSHALTKTSE DNSGTAVIHT NQTYGSSDDD  300
FSDKFEKMFT DVAPSSHTEI MEQSKTMEND TEMPVILSDQ ITGPSDDIFT EKSYAKPSNN  360
GILSKGMSND VPSLHDSKRT FTDLLGNKHV MALDSRSTFV GSSKIAEGAH AVKGWSFGSS  420
LVSSPAPNGP YGSRAIKKER VEWGEEASAF AEVSYVVKVE PDLSDEVVRP VEVRPFSAEV  480
KNLPYLELHI PPMPGRRDRG RGKVVYLRGS NGRLWPVLYP DVYSIKALTD NWTLFCRQNN  540
IKPGDECRFQ LEKDKDLLYI YKVDVKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01580.1	2e-08	B3 family protein