PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21281.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 234aa    MW: 27027.9 Da    PI: 8.6783
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.8e-057496123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C k+F ++  L  H++ H
  PIN21281.1 74 FECQYCYKVFANSQALGGHQNAH 96
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MERNSDLSCS QEKSYPEKRV KLFGIELESF HETDQGKGLK ESLSEGDESI NSSTSSTVTE  60
KQGSTGGERE DRKFECQYCY KVFANSQALG GHQNAHKKER LRKKRLQLQA RKASLNCYIQ  120
PFHYNNTIQH NNKHSFYYYG SNPTWFYDPS IHEESQISFA FNGPDRNISN SEIFRWYDNV  180
PFQEDTRTFS LTPADRLSRE KSRLAPINMP SSKKTCNRKT SLDLQLGLSL HSTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.16e-10C2H2 family protein