PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21399.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 154aa    MW: 17756 Da    PI: 8.9667
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.82.8e-141867147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
                     +g+WT+eEd ll +++ ++G g W++++ +      gRt++++k++w+++
       PIN21399.1 18 KGAWTKEEDILLRNCIDKYGEGKWHLVPLRAAgriPGRTANDVKNFWNTH 67
                     79*************************999888999************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MEGLRDTTES NIPKGVRKGA WTKEEDILLR NCIDKYGEGK WHLVPLRAAG RIPGRTANDV  60
KNFWNTHIQK KIIKKTTSST ARNIIRPRPN FPAVYRLRES FITDHQQNSE EKPENKEPSS  120
SSGEEVDECI RWWTKLLQTT DENIGDCANF RSIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66380.16e-23MYB family protein