PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21400.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 258aa    MW: 29347.8 Da    PI: 9.5775
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171158148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+++++++G g W+ ++ + g++R++k+c++rw++yl
       PIN21400.1 11 KGAWTKEEDDRLKKCIEKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYL 58
                     79********************************************97 PP
2Myb_DNA-binding48.42.2e-1564108147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg +T +E +l+v+++k+lG++ W++Ia +++ gRt++++k++w+++
       PIN21400.1  64 RGYFTRDEVDLIVRLHKLLGNR-WSLIAGRLP-GRTANDVKNFWNTH 108
                      799*******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MENNKRVGVR KGAWTKEEDD RLKKCIEKYG EGKWHQVPLR AGLNRCRKSC RLRWLNYLRP  60
NIKRGYFTRD EVDLIVRLHK LLGNRWSLIA GRLPGRTAND VKNFWNTHIQ KNINSAGADR  120
SKKNSAGAGL VLGGETEKTT TESNIIRPRP RSFSTLQVLG CPSITDHQQS KIKSENPNDK  180
QQPSFSTASL SQDQDTINDS TNDPDECIRW WSNLLEITET GKRTPFSFSN EDYQIILSPG  240
LGDASDYTDQ DGTFSSYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-63MYB family protein