PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21444.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 313aa    MW: 36660.4 Da    PI: 6.6841
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind97.81.1e-30261182103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Flkk+ye+++d  ++++isw+++g+ f+++d+++f+ +vLp++F+ snf+SFv QLn YgF+k++ e+          e+++++F++gkk+ l++ik
    PIN21444.1  26 FLKKIYEMVDDIGTNSIISWNSSGTGFIIWDHNKFSAEVLPRHFRSSNFSSFVYQLNNYGFRKMSWER---------YEYANPWFQAGKKHWLNNIK 113
                   9****************************************************************999.........78****************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r++++
    PIN21444.1 114 RRNQQ 118
                   **985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEKNSLTENE GCGDGGQEWK SSPPPFLKKI YEMVDDIGTN SIISWNSSGT GFIIWDHNKF  60
SAEVLPRHFR SSNFSSFVYQ LNNYGFRKMS WERYEYANPW FQAGKKHWLN NIKRRNQQFH  120
PTKKRSSFTA VHDSINATME TKLFAIMTEQ NDMKWTIQKL KQSLDNMENQ LAILEINTKL  180
QEFKEEKMNI AVFLKKFFQF LRKKKDEATD DTPKRPKSDE VFKQKISSSA HNDDSESSIL  240
DRKLKNTTEH AENCRFWKNM LEDGQGDLSA HHSKAIMELD EMMALNIAIE REILIEKPCD  300
PNVEDDGHLE LWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51910.15e-39HSF family protein