PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21446.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 405aa MW: 46334.5 Da PI: 4.8499

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.8	2.7e-36	15	106	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d+++++++sws+n++sf+v+++ efa+++Lp++Fkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F +g+ +ll++i+ PIN21446.1 15 FLAKTYEMVDDPSTDSIVSWSQNNKSFIVWNPPEFARDLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANEDFVRGQPHLLKNIH 102 9*************************************************************9998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PIN21446.1 103 RRKP 106 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MMDEAPCSSN SLPPFLAKTY EMVDDPSTDS IVSWSQNNKS FIVWNPPEFA RDLLPRFFKH 60 NNFSSFIRQL NTYGFRKVDP EQWEFANEDF VRGQPHLLKN IHRRKPVHSH STPNIPSLPP 120 LIESERKGYM EDIERLKCDK ESLNAELQRY KEEQQGLKVE MRALTDRVLN VEHQHAKMLS 180 SLSETLREPF SLDLTPQVEI HDRKRRFPGN RFLSDETSTE DNQRASSQIS TIENLDANSL 240 LTFNKDSLEQ LDSSLMFWEK LALDVGDVLV QRNSSLDLEL AESTSCALSP SISYTQLNLE 300 VVNKTSGIDM NSEPKTAVVP ELQPTHEDQS VATATNVRTG VNDVFWEQFL TENPGSNDSS 360 EVHSERKGAE KNENKPGDHG IYWWNMRTVN NLADQLGHLT SPERT

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MMDEAPCSSN SLPPFLAKTY EMVDDPSTDS IVSWSQNNKS FIVWNPPEFA RDLLPRFFKH  60
NNFSSFIRQL NTYGFRKVDP EQWEFANEDF VRGQPHLLKN IHRRKPVHSH STPNIPSLPP  120
LIESERKGYM EDIERLKCDK ESLNAELQRY KEEQQGLKVE MRALTDRVLN VEHQHAKMLS  180
SLSETLREPF SLDLTPQVEI HDRKRRFPGN RFLSDETSTE DNQRASSQIS TIENLDANSL  240
LTFNKDSLEQ LDSSLMFWEK LALDVGDVLV QRNSSLDLEL AESTSCALSP SISYTQLNLE  300
VVNKTSGIDM NSEPKTAVVP ELQPTHEDQS VATATNVRTG VNDVFWEQFL TENPGSNDSS  360
EVHSERKGAE KNENKPGDHG IYWWNMRTVN NLADQLGHLT SPERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-112	HSF family protein