PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21488.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 243aa MW: 26415.4 Da PI: 6.5044

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	99	121	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksF++ L H +H PIN21488.1 99 YQCKTCNKSFPSFQALGGHRASH 121 9***********99999998887 PP
2	zf-C2H2	12.3	0.0005	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H PIN21488.1 155 HECSICGAEFASGQALGGHMRRH 177 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MQSEEEVIMI KGKRSKRPRP PSPFVLTIAT NSSTTAEFTA VTAGGVITDD SGSSDRVTPS 60 PSNSGARTDE EEEDMANCLI LLARGHRQTP PPPPASEVYQ CKTCNKSFPS FQALGGHRAS 120 HRIKPNKQED DSTINLLLQI PNRVLSNHQN KSRLHECSIC GAEFASGQAL GGHMRRHRPI 180 PAAASSGSYG DQSQEVKRPR IVLSLDLNLP APEEDDCSES DFGYGPKEQV IVFSTSSLVD 240 CHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	16	20	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	3e-44	C2H2 family protein