PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21659.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 340aa    MW: 38535.8 Da    PI: 4.7126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.3e-12171214654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PIN21659.1 171 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 214
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MELTQHSLLE ELIMAPKMDT SFPSEFFPNT WNLATPPFDH QNPDLHFPVT NPSLLDLISP  60
AEFKYPCPFG ELQPFLDALT SSEYGSFYEN DDVPLNPMAV QEVYATNVEN NEQVMGFVDN  120
GMNCFEEGIT SCKVENAPLD DVPNMDVINM GLYGEKKSKM KKADGQPSKN LMAERRRRKR  180
LNDRLSMLRS IVPKISKMDR TSILGDTIDY MKELLDKIHK LREVGINDES TNQISLLGNH  240
FKEHNPNEML VRNPPKFDVE RRSQDTRVQV CCTTRPGLLL STLSTMDAMG LDIQQCVISC  300
FNDFSLQASC YEVSEHRLLV SSDDIKQALF TNAGYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174181ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.19e-80bHLH family protein