PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21682.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family DBB
Protein Properties Length: 306aa    MW: 33961 Da    PI: 6.761
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.52.3e-07443538
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                 C+ +++ e+++fC  ++  lC+ C    H+       H+
  PIN21682.1  4 QCDVCDKDEASIFCIADEAALCAACDRRVHHAnklagkHQ 43
                7******99******************9964446777776 PP
2zf-B_box28.63e-095492238
    zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
                + + C+ ++e ++ lfC++++  lC+dC  ++Hk   Ht
  PIN21682.1 54 QSPLCDICQERRAFLFCQQDRAILCKDCDIQIHKAnvHT 92
                6789*****************************888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MKIQCDVCDK DEASIFCIAD EAALCAACDR RVHHANKLAG KHQRFSLHHP SPKQSPLCDI  60
CQERRAFLFC QQDRAILCKD CDIQIHKANV HTQKHSRFLL TGVTISATST VYSESSSSSP  120
EPSSSTLTKT CSDSGSKTKS QSSKNKPVSA NPPVCTPSIN KGTIVESAPV TAPEGLNGSI  180
STSSISEYLM EMLPGWHFED FLDSSSYDFC QNQEKDMRPI WDADLENNMS VFPTEKMGFW  240
VPQVAPALDQ TQYQSAETTT IGLKEQSKEF ASNNIKSSRK RDEDNSFAVP QIIPSSTAFK  300
RSRNFW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.16e-78DBB family protein