PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21700.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 330aa    MW: 36543.1 Da    PI: 9.0033
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.2e-052202581255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  PIN21700.1 220 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 258
                 7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MESASSIHHH QLQDHLLGSS SSCYGLIGST AHDYTASSIL NANGFTSYPN ETILNPRLSS  60
NYSFMAPDFH WANTTAGSLA TQDLQLQSMR NTREEFSDHF YLKYTDSISS LNQVGLTYPG  120
SSDMNLQPLD HLPSSRFRGK FSPISSQNQI GFAKDVFSYS LNDMQQSYLM PPYAFNKISD  180
NGRSAEAKRS STKMEPNAIQ NATKKSRLEG RASCPPFKVR KEKLGDRIAA LQQLVAPFGK  240
TDTASVLMEA IGYIKFLQTQ VQTLSVPYMK RSWKKTTRLM KADRTGNEDE DQKHDLKSRG  300
LCLVPLSCMS YITDGGGGVV WPPSQFGGAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-54bHLH family protein