PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21725.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 178aa    MW: 19807 Da    PI: 6.247
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249.2e-087332246
                     T...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 22 g...tWktIartmgkgRtlkqcksrwqk 46
                     +   +W+ Ia+ ++ gRt++++k++w++
       PIN21725.1  7 NtryRWSVIASPLP-GRTDNDVKNYWNT 33
                     44557*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MLYYGANTRY RWSVIASPLP GRTDNDVKNY WNTKLKRKLL AAEKATSSIL TKNVFMRSKY  60
NFNLAPSEAS NHSVDICPNN MVHGSLESPY TCGLLPSPSL SQEAISSISS SFSLDNTVSG  120
SASWSTSGSG EDDTFLAGLR FGLTMPYNIP NAFGFEEKFS IDDQINYHPN QNWPNLWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.17e-09MYB family protein