PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21794.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 181aa MW: 20116.5 Da PI: 6.7057

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	130.3	8.2e-41	11	109	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+l+r+C+++C +apyf +++pkkfa vhk+FGasnv+++l+++pe++red+++slvyeAe+r++dPvyG++g i +lq+++ +l+++l l+++ PIN21794.1 11 SCAACKFLKRRCTPNCQFAPYFRSDEPKKFAKVHKVFGASNVSNILNEVPEDQREDTVNSLVYEAEVRLQDPVYGCIGAIASLQHKMVELQHDLILARA 109 6*******************************************************************************************9988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MKSQEPRSSS SCAACKFLKR RCTPNCQFAP YFRSDEPKKF AKVHKVFGAS NVSNILNEVP 60 EDQREDTVNS LVYEAEVRLQ DPVYGCIGAI ASLQHKMVEL QHDLILARAR LACYLEQVQN 120 INHTSNSGSG LDAQGNVFNM GTGFGGFQEG SSGINVDQAF DHIHNNLVFD HHFSTSSFQF 180 P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11090.1	2e-62	LBD family protein