PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21928.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 239aa    MW: 26376.2 Da    PI: 6.5893
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.34.2e-18154188135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  PIN21928.1 154 CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 188
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDVYGGLSVD DLLDLPSDDF ISSSSSSSAA TAVSDFLPHY PSSAATTYYE QSSAPGYSSD  60
FTDILCVPTD HAAELEWVSN YMDDSFSNFP APNELTTAVN FQSKNAAGFD CRARCKRSWP  120
STSATVENHM PSGGNVKKEE HISGTEKADV ARRCTHCASE KTPQWRTGPL GPKTLCNACG  180
VRYKSGRLVP EYRPAASPTF VLTQHSNSHR KVLELRRQKE LLLQQQQQQE AYGHHFRVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.17e-58GATA family protein