PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21993.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 303aa    MW: 33797.9 Da    PI: 8.0141
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.4e-122341145
                     HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +l++a+ ++G++ W+ Ia+ ++ gRt++++k++w+
       PIN21993.1  2 ILIKAHGLYGNK-WSEIAKLLP-GRTENSVKNHWN 34
                     69**********.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MILIKAHGLY GNKWSEIAKL LPGRTENSVK NHWNCSLKKK LDNYLASCPA SKHPRFGNKP  60
ETGTHFVEAK QSLSTKCLQI ELMDGGNGGE SCCLDLALGC SSNSSNHRPS TCSKIELFLD  120
KNDTSHSTPD YLSCNDKDFT MSCSFRPRQH SDIHDNPETS LDWPYSYTGL CYEPIQNANS  180
NIFLSTGRFP STGSFIRQPN RSISVPPSRS HINSSCSPKA ILRRAAMSYD NVPSIIRKRA  240
IQRDVSTQDN VDDSLNEVQK VDDDDGVQNL REYVFFPPKY QKVEKFAAIK SVGKCLESAF  300
ADA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00540.23e-19MYB family protein