PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22060.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 100aa    MW: 11600.4 Da    PI: 10.5216
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.7e-172673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll++++  +G g+W++ ar+ g++Rt+k+c++rw++yl
       PIN22060.1 26 RGPWTLEEDNLLIKYISCHGEGRWNSSARCAGLKRTGKSCRLRWLNYL 73
                     89*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MIMSKVRINP KGTSTNLYES SSELRRGPWT LEEDNLLIKY ISCHGEGRWN SSARCAGLKR  60
TGKSCRLRWL NYLKPDIKRG NLTPQEQLLI LELHSKWGNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.18e-46MYB family protein