PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22092.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 201aa MW: 21678.8 Da PI: 7.1524

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	100.7	1.4e-31	2	104	1	98
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C++lrr+C+++C+l+p++ p++q++++ +v k+FG+s ++++++a+pe++r+++++sl++eA+ ra +Pv+Gavg++++++++++q+++e+ PIN22092.1 2 SCNGCRILRRGCTEHCILRPCLewierPQAQANATLFVSKFFGRSDLMSFISAVPENKRPALFQSLLFEACGRAVNPVSGAVGLLSAGNWHICQAAVET 100 6************************************************************************************************99 PP DUF260 95 allk 98 +l++ PIN22092.1 101 VLAG 104 8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MSCNGCRILR RGCTEHCILR PCLEWIERPQ AQANATLFVS KFFGRSDLMS FISAVPENKR 60 PALFQSLLFE ACGRAVNPVS GAVGLLSAGN WHICQAAVET VLAGGTLQPM PIGVLPSNAE 120 QESEEFGFIS LQSSSNQKRI LRGISIGGES RPLSDSGSWN CMENTASMVS EISEIWPEFG 180 GSGNGVKRVG SKEPKLLNLF A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	1e-60	LBD family protein